RESEARCH BASE
Search 3,721 documents across 34 fields — every claim tier-rated by evidence
3,633 are the core, quality-scored corpus (34 lettered sections — see How We Work); the remaining 88 are cross-corpus synthesis documents (68 InterDocs, 12 Connections, 8 Theories) also indexed here.
177 results for "ghost DNA" — page 5 of 9
Z_3_02 — Epigenetic Inheritance & Transgenerational Effects
Epigenetic inheritance refers to the transmission of phenotypic information across generations through mechanisms other than changes in DNA sequence. The three primary molecular mechanisms — DNA methylation, histone modi
Z_3_09 — Conservation Genetics and Endangered Species
Conservation genetics applies population genetics, genomics, and molecular biology to the preservation of biological diversity. At its core is the recognition that genetic diversity — the raw material for adaptation to c
Z_3_05 — Viral Integration and Endogenous Retroviruses
Approximately 8% of the human genome consists of human endogenous retroviruses (HERVs) — the remnants of ancient retroviral infections that integrated into germline cells and were subsequently inherited vertically like a
Z_2_15 — Future of Genomics and Personalized Medicine
Genomics is undergoing a transition from research tool to clinical infrastructure. The cost of whole-genome sequencing (WGS) has plummeted from $2.7 billion (Human Genome Project, 1990–2003) to ~$200 per genome (Illumina
Z_2_10 — Genetics of Aging and Progeria
Aging — the progressive decline in physiological function leading to increased vulnerability to disease and death — has a substantial genetic component: twin studies estimate heritability of human lifespan at ~25–30% (He
Z_2_09 — Mitochondrial Genetics and Diseases
Human mitochondrial DNA (mtDNA) is a 16,569-bp circular genome encoding 37 genes: 13 proteins (all subunits of the oxidative phosphorylation/OXPHOS complexes I, III, IV, and V), 22 transfer RNAs, and 2 ribosomal RNAs. Un
Z_1_08 — Transposons and Mobile Genetic Elements
Transposable elements (TEs, transposons) — segments of DNA that can move or copy themselves to new genomic locations — are among the most abundant and influential components of eukaryotic genomes. Discovered by Barbara M
Z_1_04 — Gene Expression and Regulation
Gene expression regulation — the molecular mechanisms controlling when, where, and how much each gene is active — is the central process that enables a single genome to produce ~200 distinct cell types, orchestrate embry
Z_1_05 — Genomic Imprinting and Parent-of-Origin Effects
Genomic imprinting is an epigenetic phenomenon in which a gene's expression depends on whether it was inherited from the mother or the father — violating the standard Mendelian assumption that both parental copies functi
Z_1_03 — Human Genome Project and Its Legacy
The Human Genome Project (HGP), launched in 1990 and completed in 2003, was the largest coordinated biological research effort in history — a $3 billion, 13-year international collaboration to sequence all ~3.2 billion b
K_4_01 — Shamanism, Entheogens & Serpent Visions
Shamanism as a cross-cultural altered-state practice is Tier 1 anthropology (Eliade 1964, Winkelman 2010). Clinical psilocybin and DMT research is Tier 1 (Griffiths 2006/2019, Strassman 2001, Davis 2021). The consistent
E_3_22 — Historic Mega-Earthquakes: Cascadia, New Madrid, and the Seismic Record
The seismic record of North America reveals two mega-earthquake systems that challenge the common assumption that destructive earthquakes are confined to well-known plate boundaries like the San Andreas Fault: the Cascad
E_5_08 — Justinianic Plague & Late Antique Pandemics
The Justinianic Plague (541–750 CE) was the first historically documented pandemic of bubonic plague caused by Yersinia pestis, striking the Byzantine Empire at the height of Emperor Justinian I's reconquest campaigns. A
E_5_10 — Justinianic Plague: The First Pandemic and the Fall of the Ancient World
The Justinianic Plague (541–750 CE) — the first historically documented pandemic of bubonic plague caused by Yersinia pestis — struck the Byzantine Empire at the height of Emperor Justinian I's attempted reconquest of th
ZG_5_18 — Kurgan Hypothesis: Indo-European Origins and Steppe Migrations
The Kurgan hypothesis, formulated by Lithuanian-American archaeologist Marija Gimbutas in 1956 and elaborated through the 1970s–1990s, proposes that the Proto-Indo-European (PIE) language originated among pastoralist com
TH_06 — The Dislocated Consciousness Hypothesis
Almost nobody seriously doubts that people experience ghosts — the felt presence, the figure on the stair, the certainty of being watched. The real question is what produces those experiences, and the honest answer is th
Q_4_32 — The Fundamental Constants: Physics, Life, and Mathematics
The universe runs on numbers — and not arbitrary ones. A small set of fundamental constants, mostly dimensionless, determines every property of matter, energy, space, and time. Change any of them by a fraction and atoms
INTERDOC_65 — The Constants of Existence: A Cross-Domain Architecture
[KEY FINDING] The universe appears to run on approximately 30 physical constants (CODATA 2022), none of which are derived from theory. Life on Earth obeys approximately 12 biological constants (genetic code, ATP, homochi
INTERDOC_11 — Mitochondrial Eve, Y-Chromosomal Adam, and the Convergence Problem
Mitochondrial Eve — the most recent common ancestor (MRCA) of all living humans through an unbroken maternal line — was identified through mtDNA analysis by Rebecca Cann, Mark Stoneking, and Allan Wilson at UC Berkeley i
INTERDOC_13 — Out of Africa vs. Multiregional: The Synthesis That Changed Everything
The two dominant models of human origins battled from the 1980s through the 2010s. Chris Stringer and Peter Andrews championed the Recent African Origin (RAO) model (1988, Science): anatomically modern humans evolved exc
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