RESEARCH BASE

Search 3,721 documents across 34 fields — every claim tier-rated by evidence

3,721 Documents 34 Sections 43,625 Citations 34,852 Keywords Indexed 4 Evidence Tiers

3,633 are the core, quality-scored corpus (34 lettered sections — see How We Work); the remaining 88 are cross-corpus synthesis documents (68 InterDocs, 12 Connections, 8 Theories) also indexed here.

19 results for "phylogenetics"

Z_4_07 Verified Molecular Biology

Z_4_07 — The Tree of Life: Molecular Phylogenetics and Universal Ancestry

The Tree of Life — the branching diagram representing the evolutionary relationships among all living organisms — has been fundamentally reshaped by molecular phylogenetics, the reconstruction of evolutionary history usi

tree of life phylogenetics universal common ancestor LUCA molecular phylogeny horizontal gene transfer
P_5_02 Verified Philosophy & Meaning

P_5_02 — Computational Phylogenetics of Mythology

This document examines Computational Phylogenetics of Mythology, a topic within the Philosophy Meaning research area. Key areas of investigation include The Traditional Approach: Comparative Mythology, The Biological Ana

phylogenetics mythology Yuri Berezkin Julien d'Huy Michael Witzel Laurasian
R_3_09 Verified Biology & Evolution

R_3_09 — Molecular Phylogenetics and Tree of Life

Molecular phylogenetics — reconstructing evolutionary relationships from DNA, RNA, and protein sequences — has revolutionized our understanding of the tree of life since Carl Woese's landmark 1977 discovery, using small-

phylogenetics molecular clock tree of life cladistics maximum likelihood Bayesian
C_1_15 Verified Global Traditions

C_1_15 — Oral Tradition Fidelity: How Accurately Do Myths Preserve Historical Facts?

Oral traditions have long been treated with skepticism by historians trained in text-based source criticism, yet mounting evidence suggests that under certain conditions, oral narratives can preserve accurate information

oral tradition memory fidelity Aboriginal Australian sea-level rise folklore phylogenetics Vansina
Z_5_13 Verified Molecular Biology

Z_5_13 — Molecular Clocks: Timing Evolution at the Sequence Level

Molecular clocks — the observation that DNA and protein sequences accumulate substitutions (mutations that become fixed in a lineage) at approximately regular rates over long periods of evolutionary time, enabling the es

molecular clock neutral theory substitution rate Zuckerkandl Pauling calibration
U_4_03 Verified Art, Music & Culture

U_4_03 — Cultural Evolution — Dual Inheritance and Cumulative Culture

Cultural evolution theory applies Darwinian principles — variation, selection, inheritance — to the transmission and transformation of cultural information (beliefs, technologies, norms, institutions). The dual inheritan

cultural evolution dual inheritance gene-culture coevolution cumulative culture Boyd Richerson memetics
ZG_3_17 Credible Linguistics & Communication

ZG_3_17 — Historical Linguistics Methodology

Historical linguistics is the scientific study of how languages change over time, the genealogical classification of languages into families, and the reconstruction of unattested ancestral languages through systematic co

historical-linguistics comparative-method sound-change reconstruction proto-language language-families
Credible

INTERDOC_42 — The Serpent Being: Humanity's Oldest and Most Inverted Mythology

[KEY FINDING] Before the rise of Indo-European and Abrahamic traditions, serpent beings were the most widely venerated entity category on Earth:

serpent snake dragon Naga Quetzalcoatl Ouroboros
ZB_2_21 Verified Ecology & Biology

ZB_2_21 — Horizontal Gene Transfer & Microbial Evolution

Horizontal gene transfer (HGT) — also called lateral gene transfer (LGT) — is the transmission of genetic material between organisms by mechanisms other than parent-to-offspring (vertical) inheritance. HGT is the dominan

horizontal gene transfer lateral gene transfer conjugation transduction transformation mobile genetic elements
ZB_5_21 Verified Ecology & Biology

ZB_5_21 — Lateral Gene Transfer: Horizontal Exchange and Evolutionary Implications

Lateral gene transfer (LGT), also called horizontal gene transfer (HGT), is the movement of genetic material between organisms by mechanisms other than vertical parent-to-offspring inheritance. First recognized in bacter

lateral gene transfer horizontal gene transfer HGT LGT phylogenetics tree of life
G_4_16 Verified Modern Frameworks

G_4_16 — Comparative Mythology as Science — Phylogenetic and Statistical Approaches

Comparative mythology — the systematic study of myths and folktales across cultures to identify shared elements, trace historical relationships, and understand the cognitive and social processes that generate mythologica

comparative mythology phylomythology phylogenetic analysis d'Huy Tehrani Witzel
G_2_16 Credible Modern Frameworks

G_2_16 — Phylogenetic Methods in Material Culture Analysis

Phylogenetic methods — originally developed in evolutionary biology to reconstruct the branching history of species from shared inherited characteristics — have been adapted for analyzing the evolutionary (descent-with-m

phylogenetics cladistics cultural phylogeny material culture tree branching
G_2_03 Verified Modern Frameworks

G_2_03 — Bayesian Reasoning and Archaeological Inference

Bayesian reasoning — the systematic updating of probabilities for hypotheses as new evidence is acquired — has transformed archaeology, chronology, and the evaluation of disputed historical claims since the 1990s. At its

Bayesian inference Bayes theorem prior probability posterior likelihood radiocarbon calibration
ZD_4_08 Verified Information & Computation

ZD_4_08 — Bioinformatics and Computational Biology

Bioinformatics — the application of computational methods to biological data, especially molecular sequences — has become indispensable to modern biology. The field emerged from the convergence of molecular biology's dat

bioinformatics computational biology sequence alignment BLAST genome assembly phylogenetics
L_4_03 Verified Genetics & Origins

L_4_03 — Genetic Clocks and Molecular Dating

The molecular clock — the concept that DNA and protein sequences accumulate mutations at approximately regular rates over time — provides a powerful tool for dating evolutionary divergences independently of the fossil re

molecular clock mutation rate molecular dating divergence time substitution rate neutral theory
R_4_18 Verified Biology & Evolution

R_4_18 — Virology and Viral Evolution

Virology — the study of viruses, their structure, classification, evolution, and interactions with hosts — has undergone a revolution since the development of high-throughput sequencing, revealing that viruses are the mo

virology viral evolution RNA virus DNA virus quasispecies zoonosis
R_2_10 Verified Biology & Evolution

R_2_10 — Primate Evolution and the Hominid Lineage

The order Primates, originating ~65–80 million years ago, encompasses prosimians (lemurs, tarsiers), monkeys, and apes. The human lineage (Hominini) diverged from the chimpanzee lineage ~6–7 Mya, based on molecular clock

primate hominid hominini great ape human evolution bipedalism
R_1_13 Verified Biology & Evolution

R_1_13 — Archaea: The Third Domain and Extremophilic Diversity

Archaea constitute the third domain of life — neither Bacteria nor Eukarya — recognized as a distinct lineage by Carl Woese and George Fox in 1977 through revolutionary 16S ribosomal RNA phylogenetic analysis. For decade

Archaea third domain Carl Woese extremophile thermophile halophile
R_1_12 Verified Biology & Evolution

R_1_12 — History of Evolutionary Theory

Evolutionary theory — the unifying framework of modern biology — has itself undergone a remarkable evolution over more than two centuries. Pre-Darwinian ideas included Lamarck's transformism (1809), which proposed that o

history of evolution Darwin Wallace Origin of Species natural selection Lamarck