RESEARCH BASE

Search 3,721 documents across 34 fields — every claim tier-rated by evidence

3,721 Documents 34 Sections 43,625 Citations 34,852 Keywords Indexed 4 Evidence Tiers

3,633 are the core, quality-scored corpus (34 lettered sections — see How We Work); the remaining 88 are cross-corpus synthesis documents (68 InterDocs, 12 Connections, 8 Theories) also indexed here.

72 results for "genome editing" — page 1 of 4

Z_5_10 Verified Molecular Biology

Z_5_10 — Genome Editing Beyond CRISPR: TALENs, Base Editors, Prime Editors, and Next-Generation Tools

While CRISPR-Cas9 (covered in Z_1_02) dominates the genome editing landscape, it is neither the first nor the only precision genome editing technology. The field began with zinc finger nucleases (ZFNs) in the early 2000s

genome editing TALENs zinc finger nucleases ZFN base editing prime editing
R_3_20 Verified Biology & Evolution

R_3_20 — CRISPR & Gene Editing Technology

CRISPR-Cas9 is the most transformative biological technology since PCR, enabling precise, programmable editing of DNA in virtually any organism. The system was adapted from a bacterial immune defense mechanism first iden

CRISPR Cas9 gene editing genome engineering Jennifer Doudna Emmanuelle Charpentier
Z_5_15 Verified Molecular Biology

Z_5_15 — Synthetic Genomes: Designing and Building Life from Scratch

Synthetic genomics — the design, construction, and transplantation of complete genomes assembled from chemically synthesized oligonucleotides — represents one of the most ambitious enterprises in modern biology, with the

synthetic genome Craig Venter Mycoplasma mycoides JCVI-syn3.0 minimal genome synthetic biology
Z_2_05 Verified Molecular Biology

Z_2_05 — Gene Therapy: History and Progress

Gene therapy — the introduction, alteration, or replacement of genetic material within a patient's cells to treat or cure disease — has evolved from a speculative concept to an approved clinical reality over five decades

gene therapy gene replacement viral vector adeno-associated virus AAV lentivirus
Z_1_16 Verified Molecular Biology

Z_1_16 — Transposable Elements: Jumping Genes and Genome Evolution

Transposable elements (TEs) — sequences of DNA capable of moving ("jumping") from one genomic location to another — constitute approximately 45% of the human genome and up to 85% of the maize genome, making them the sing

transposable elements jumping genes Barbara McClintock retrotransposons DNA transposons Alu elements
Z_1_18 Verified Molecular Biology

Z_1_18 — Junk DNA & the ENCODE Controversy: Function, Noise, and the Human Genome

The term "junk DNA" — coined by Susumu Ohno (1972) to describe non-coding DNA sequences in eukaryotic genomes that appeared to have no functional role — ignited one of the most contentious debates in modern genomics: how

junk DNA ENCODE non-coding DNA transposable elements selfish DNA C-value paradox
ZE_3_17 Verified Ethics & Applied Philosophy

ZE_3_17 — CRISPR Ethics: Gene Editing and the Future of Humanity

The development of CRISPR-Cas9 gene editing — demonstrated by Jennifer Doudna and Emmanuelle Charpentier in 2012 (Nobel Prize in Chemistry, 2020) — created the most precise, accessible, and affordable tool for modifying

CRISPR-Cas9 gene editing germline editing He Jiankui somatic editing designer babies
S_2_01 Verified Future Technology

S_2_01 — CRISPR and Human Genetic Engineering

CRISPR-Cas9 is the most transformative biotechnology discovery of the 21st century — a molecular tool that allows precise editing of DNA in any organism, including humans. Discovered in bacteria's immune system against v

CRISPR Cas9 gene editing germline editing He Jiankui somatic editing
Z_5_17 Verified Molecular Biology

Z_5_17 — CRISPR-Cas9 Mechanism and Applications

CRISPR-Cas9 (Clustered Regularly Interspaced Short Palindromic Repeats and CRISPR-associated protein 9) is a revolutionary genome-editing technology adapted from the natural adaptive immune system of bacteria and archaea

CRISPR Cas9 gene editing guide RNA PAM double-strand break
Z_5_16 Verified Molecular Biology

Z_5_16 — Synthetic Minimal Genomes: Designing Life from First Principles

The construction of synthetic minimal genomes — chemically synthesized chromosomes containing only the genes essential for autonomous cellular life — represents one of the most audacious achievements in modern biology, d

synthetic-genome minimal-genome mycoplasma-mycoides jcvi-syn1 jcvi-syn3 synthetic-biology
Z_5_07 Verified Molecular Biology

Z_5_07 — Epigenome Mapping: Charting the Chemical Modifications of DNA and Chromatin

Epigenome mapping — the systematic, genome-wide identification and quantification of epigenetic modifications (chemical marks on DNA and histone proteins that regulate gene expression without changing the underlying DNA

epigenome DNA methylation bisulfite sequencing ATAC-seq ChIP-seq histone modification
Z_1_03 Verified Molecular Biology

Z_1_03 — Human Genome Project and Its Legacy

The Human Genome Project (HGP), launched in 1990 and completed in 2003, was the largest coordinated biological research effort in history — a $3 billion, 13-year international collaboration to sequence all ~3.2 billion b

Human Genome Project HGP genome sequencing Francis Collins Craig Venter Celera
Z_1_12 Verified Molecular Biology

Z_1_12 — Genome Architecture and 3D Organization

The human genome — approximately 6.4 billion base pairs of DNA — is packed into a nucleus only ~6 μm in diameter. If stretched end-to-end, the DNA of a single human cell would extend about 2 meters, yet it is packaged an

genome architecture 3D genome chromatin organization topologically associating domains TADs chromosome territories
Z_1_11 Verified Molecular Biology

Z_1_11 — Polyploidy and Genome Duplication

Polyploidy — the possession of more than two complete sets of chromosomes — is a major force in genome evolution, particularly in plants and some animal lineages. Susumu Ohno (1970) proposed that whole genome duplication

polyploidy genome duplication whole genome duplication WGD autopolyploidy allopolyploidy
Z_4_05 Verified Molecular Biology

Z_4_05 — Synthetic Biology and Minimal Genomes

Synthetic biology aims to design, construct, and engineer biological systems and organisms with novel functions not found in nature — or to redesign existing biological systems for useful purposes. The field's landmark a

synthetic biology minimal genome JCVI-syn3.0 Mycoplasma mycoides synthetic cell Venter
L_1_10 Verified Genetics & Origins

L_1_10 — Neanderthal Genome and Legacy in Modern Humans

The sequencing of the Neanderthal genome ranks among the most significant achievements in modern biology. Beginning with the draft genome of Green et al. (2010) and refined by later high-coverage genomes from the Altai,

Neanderthal genome Neanderthal admixture archaic introgression Vindija Altai Neanderthal Homo neanderthalensis
R_5_18 Verified Biology & Evolution

R_5_18 — Synthetic Biology & Artificial Genomes

Synthetic biology is an interdisciplinary field that applies engineering principles — standardization, modular design, abstraction hierarchies — to biological systems, with the ultimate goal of designing and constructing

synthetic biology artificial genome JCVI-syn3.0 minimal cell Craig Venter xenobiology
L_3_18 Verified Genetics & Origins

L_3_18 — Horizontal Gene Transfer in Eukaryotes

Horizontal gene transfer (HGT) — the movement of genetic material between organisms through mechanisms other than vertical parent-to-offspring inheritance — was long considered a predominantly prokaryotic phenomenon, cen

horizontal gene transfer lateral gene transfer HGT LGT eukaryotes introgression
ZE_3_18 Credible Ethics & Applied Philosophy

ZE_3_18 — Frontier Ethics Survey

Frontier ethics examines the moral dimensions of technologies and practices at the edge of current scientific capability — where regulatory frameworks, ethical traditions, and public understanding lag behind technologica

frontier ethics consciousness uploading psychedelic therapy regulation CRISPR germline editing longevity ethics UAP technology
S_2_13 Verified Future Technology

S_2_13 — Xenotransplantation: Cross-Species Organs and Bioengineered Tissues

Xenotransplantation — the transplantation of organs, tissues, or cells from one species to another — is being pursued as a solution to the critical global organ shortage. In the US alone, over 100,000 people await organ

xenotransplantation pig porcine organ transplant gene editing CRISPR