RESEARCH BASE

Search 3,721 documents across 34 fields — every claim tier-rated by evidence

3,721 Documents 34 Sections 43,625 Citations 34,852 Keywords Indexed 4 Evidence Tiers

3,633 are the core, quality-scored corpus (34 lettered sections — see How We Work); the remaining 88 are cross-corpus synthesis documents (68 InterDocs, 12 Connections, 8 Theories) also indexed here.

27 results for "bacteria" — page 1 of 2

ZB_2_18 Verified Ecology & Biology

ZB_2_18 — Phage-Bacteria Coevolution: Arms Races in the Microbial World

Bacteriophages (phages) — viruses that infect and replicate within bacteria — are the most abundant biological entities on Earth (~10³¹ total particles, outnumbering bacteria ~10:1 in most environments), and their coevol

bacteriophage phage therapy CRISPR Red Queen phage-bacteria coevolution
R_3_19 Verified Biology & Evolution

R_3_19 — Bacterial Chemotaxis and Signal Transduction

Bacterial chemotaxis — the ability of bacteria to sense chemical gradients in their environment and direct their movement accordingly — is one of the most thoroughly understood signal transduction systems in all of biolo

chemotaxis bacteria signal transduction two-component system chemoreceptor CheA
ZF_2_14 Verified Oceanography

ZF_2_14 — Marine Microbiology: Deep-Sea Viruses and Bacterial Ecology

The deep ocean harbors the largest and most diverse microbial ecosystem on Earth — a vast realm of bacteria, archaea, and viruses that drive global biogeochemical cycles, recycle organic matter, and sustain life in condi

marine microbiology deep-sea viruses bacteriophage marine bacteria viral shunt biogeochemical cycling
K_4_20 Verified Consciousness

K_4_20 — Non-Neural Learning: Slime Molds, Plants, Bacterial Adaptation

Learning — modifying behavior based on experience — was long thought to require a nervous system. The last twenty years of basal-cognition research have empirically falsified this assumption. Single-celled slime molds (P

basal cognition non-neural learning habituation Physarum polycephalum Mimosa pudica plant memory
R_1_09 Verified Biology & Evolution

R_1_09 — The Great Oxidation Event: Oxygen, Cyanobacteria, and Earth's Atmospheric Transformation

The Great Oxidation Event (GOE), occurring approximately 2.4–2.1 billion years ago during the Paleoproterozoic, was the most dramatic chemical transformation in Earth's history — atmospheric oxygen rose from trace levels

Great Oxidation Event GOE cyanobacteria oxygenic photosynthesis atmospheric oxygen banded iron formations
L_5_09 Verified Genetics & Origins

L_5_09 — Human Microbiome Co-Evolution: Ancient Gut Companions

The human microbiome — the trillions of bacteria, archaea, fungi, and viruses that inhabit our bodies, particularly the gastrointestinal tract — is not merely a passive inhabitant but a co-evolved partner that has shaped

microbiome gut bacteria co-evolution Helicobacter pylori human migration paleomicrobiology
X_2_07 Verified Medicine & Healing

X_2_07 — Gut Microbiome and Digestive Health

The gut microbiome — the community of trillions of microorganisms (bacteria, archaea, fungi, viruses) inhabiting the human gastrointestinal tract — has emerged as one of the most transformative areas of biomedical resear

microbiome gut bacteria digestive health probiotics dysbiosis fecal transplant
ZF_2_20 Verified Oceanography

ZF_2_20 — Submarine Volcanic Ecosystems

Submarine volcanic ecosystems — biological communities thriving at hydrothermal vents, volcanic seamounts, and submarine caldera environments — represent one of the most profound biological discoveries of the 20th centur

hydrothermal vent submarine volcano chemosynthesis extremophile black smoker deep-sea
ZF_2_07 Verified Oceanography

ZF_2_07 — Marine Microbiology and Plankton

Marine microorganisms — bacteria, archaea, protists, viruses, and microscopic algae — constitute the invisible foundation of ocean life, driving global biogeochemical cycles, producing roughly half of the world's oxygen,

marine microbiology plankton phytoplankton zooplankton cyanobacteria diatom
ZF_4_14 Verified Oceanography

ZF_4_14 — Harmful Algal Blooms: Red Tides, Toxins, and Eutrophication

Harmful algal blooms (HABs) — rapid proliferations of microscopic algae (phytoplankton) or cyanobacteria that produce toxins, deplete oxygen, or otherwise damage marine ecosystems, fisheries, and human health — are incre

harmful algal bloom HAB red tide algal toxin eutrophication paralytic shellfish poisoning
Z_5_02 Verified Molecular Biology

Z_5_02 — Metagenomics and Environmental DNA

Metagenomics — the sequencing and analysis of genetic material recovered directly from environmental samples without culturing organisms — has revealed that the vast majority of Earth's microbial diversity was invisible

metagenomics environmental DNA eDNA shotgun sequencing 16S rRNA amplicon
Z_4_20 Verified Molecular Biology

Z_4_20 — Quorum Sensing in Bacteria

Quorum sensing (QS) is a chemical communication system used by bacteria to coordinate gene expression in response to population density — enabling single-celled organisms to exhibit collective behaviors that would be ine

quorum sensing autoinducer AHL AI-2 bioluminescence biofilm
Z_4_01 Verified Molecular Biology

Z_4_01 — Human Microbiome, Gut-Brain Axis, and the Holobiont Concept

The human microbiome — the ~38 trillion microbial cells (bacteria, archaea, fungi, viruses) inhabiting the human body — constitutes a co-evolved ecosystem that profoundly influences health, immunity, metabolism, developm

microbiome gut-brain axis holobiont microbiota bacteria gut flora
K_3_09 Credible Consciousness

K_3_09 — Minimal Consciousness and the Threshold of Sentience

Where does consciousness begin? This question — the problem of the threshold of sentience — is one of the most challenging in consciousness studies because it requires identifying what KIND of physical system is minimall

minimal consciousness sentience threshold consciousness markers biological consciousness single cell behavior bacterial cognition
E_2_12 Verified Cataclysms & Chronology

E_2_12 — Great Oxygenation Event

The Great Oxygenation Event (GOE) — approximately 2.4–2.1 billion years ago — was one of the most transformative events in Earth's history: the first permanent rise of free molecular oxygen (O₂) in the atmosphere, from n

Great Oxygenation Event GOE oxygen crisis cyanobacteria photosynthesis Paleoproterozoic
ZB_2_03 Verified Ecology & Biology

ZB_2_03 — Biomineralization and Biological Engineering

Biomineralization — the process by which living organisms produce minerals — represents one of the most sophisticated feats of biological engineering on Earth. From nacre (mother of pearl), whose alternating layers of ar

biomineralization nacre bone coral diatoms Fibonacci
ZB_2_14 Verified Ecology & Biology

ZB_2_14 — Photosynthesis Evolution and Diversity

Photosynthesis — the conversion of light energy into chemical energy — is arguably the most important biochemical process on Earth, responsible for virtually all atmospheric oxygen and the primary energy input for nearly

photosynthesis oxygenic photosynthesis anoxygenic chloroplast endosymbiosis Great Oxidation Event
ZB_2_07 Verified Ecology & Biology

ZB_2_07 — Bioluminescence: Living Light in Nature

Bioluminescence — the production and emission of light by living organisms — is one of life's most extraordinary and widespread adaptations. It has evolved independently at least 94 times across the tree of life, from ba

bioluminescence luciferin luciferase aequorin GFP green fluorescent protein
ZB_5_28 Verified Ecology & Biology

ZB_5_28 — Photosynthesis: Light Harvesting, Carbon Fixation, and the Bioenergetic Foundation of Life

Photosynthesis — the conversion of light energy into chemical energy by living organisms — is the bioenergetic foundation of virtually all life on Earth, fixing approximately 120 billion tonnes of carbon annually and pro

photosynthesis chlorophyll Calvin cycle light reactions photosystem carbon fixation
ZB_3_21 Verified Ecology & Biology

ZB_3_21 — Soil Microbiome

The soil microbiome encompasses the entire community of microorganisms inhabiting soil — bacteria, archaea, fungi, protists, and viruses — constituting the most biodiverse ecosystem on Earth. [KEY FINDING] A single gram

soil microbiome rhizosphere mycorrhiza bacteria fungi archaea